CompartmentEqualityConstraint

class CompartmentEqualityConstraint(weight, i, j, parameter, erange, crange)

Bases: object

An CompartmentEqualityConstraint adds a penalty to the residual if 2 compartments of the e matrix differ more than by just a scaling parameter in the sum over a given range. It calculates as

penalty = weight * (parameter * sum(c[range, i]) - c[range, j])

Methods Summary

calculate

Methods Documentation

calculate(e_matrix, parameter)

crange = None

The range on the c matrix axis the constraint is applied on

erange = None

The range on the e matrix axis the constraint is applied on

i = None

Index of the first compartment

j = None

Index of the second compartment

parameter = None

Index of the parameter

weight = None

Weight factor of the penalty